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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7131359 chr11:77617433 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 11.42 7.27E-27 Box Plot
THCA rs71318929 chr22:24029075 A/G IGLL3 chr22:25713888-25716191:+ 0.73 10.49 2.71E-23 Box Plot
THCA rs71329907 chr21:24637656 C/T OSTM1 chr6:108362613-108487058:- 0.58 5.96 4.87E-9 Box Plot
THCA rs71345536 chr2:132189491 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs71345541 chr2:132192964 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.54 1.6E-10 Box Plot
THCA rs71345542 chr2:132192967 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.54 1.6E-10 Box Plot
THCA rs71345551 chr2:132199116 G/C CCDC74B chr2:130896860-130902707:- 0.4 6.87 1.96E-11 Box Plot
THCA rs71345552 chr2:132199134 C/T CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs71345553 chr2:132200256 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs71345554 chr2:132200307 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs71345555 chr2:132200529 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs71345579 chr2:132206896 T/C CCDC74B chr2:130896860-130902707:- 0.36 6.22 1.1E-9 Box Plot
THCA rs71347111 chr2:132253968 C/G CCDC74B chr2:130896860-130902707:- 0.41 7.3 1.17E-12 Box Plot
THCA rs71347112 chr2:132253987 A/G CCDC74B chr2:130896860-130902707:- 0.41 7.28 1.43E-12 Box Plot
THCA rs71347129 chr2:132268094 G/A CCDC74B chr2:130896860-130902707:- 0.42 7.46 4.13E-13 Box Plot